Geometric, Feature-based and Graph-based Approaches for the Structural Analysis of Protein Binding Sites : Novel Methods and Computational Analysis

Geometric, Feature-based and Graph-based Approaches for the Structural Analysis of Protein Binding Sites : Novel Methods and Computational Analysis

In this thesis, protein binding sites are considered. To enable the extraction of information from the space of protein binding sites, these binding sites must be mapped onto a mathematical space. This can be done by mapping binding sites onto vectors, graphs or point clouds. To finally enable a str...

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Bibliographic Details
Main Author: Fober, Thomas
Contributors: Hüllermeier, Eyke (Prof. Dr.) (Thesis advisor)
Format: Doctoral Thesis
Language:English
Published: Philipps-Universität Marburg 2013
Subjects:
Feature Vectors
Proteinbindetasche
Merkmalvektoren
Graphs
Punktmenge
Punktwolken
Protein Binding Sites
Informatik
Distances
Labeled Point Clouds
Graphen
Distanzen
Data processing Computer science
Online Access:PDF Full Text
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Summary:In this thesis, protein binding sites are considered. To enable the extraction of information from the space of protein binding sites, these binding sites must be mapped onto a mathematical space. This can be done by mapping binding sites onto vectors, graphs or point clouds. To finally enable a structure on the mathematical space, a distance measure is required, which is introduced in this thesis. This distance measure eventually can be used to extract information by means of data mining techniques.
DOI:10.17192/z2013.0126

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