On the growth performance of two competing species in an Andean pasture of southern Ecuador - monitoring and simulations

The megadiverse tropical mountain forests in the southeastern Andes of Ecuador, including their biodiversity and ecosystem services, are severely threatened due to climate warming and the clearing of forests to produce pasture land. The common local practice of recurrent burning for pasture rejuvena...

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1. Verfasser: Silva, Brenner Stefan Gomes
Beteiligte: Bendix, Jörg (Prof. Dr.) (BetreuerIn (Doktorarbeit))
Format: Dissertation
Veröffentlicht: Philipps-Universität Marburg 2013
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1. Bendix, J., Silva, B., Roos K., Göttlicher D., Rollenbeck R., Nauß T., Beck E. 2010. Model parameterization to simulate and compare the PAR absorption potential of two competing plant species. International Journal of Biometeorology, doi:10.1007/s00484-009-0279-3

2. Silva, B., Roos, K., Voss, I., König, N., Rollenbeck, R., Scheibe, R., Beck, E., Bendix, J. 2012. Simulating canopy photosynthesis for two competing species of an anthropogenic grassland community in the Andes of southern Ecuador. Ecological Modelling, doi:10.1016/j.ecolmodel.2012.01.016.

3. Valeriano, D.M.; Silva, B.S.G., Clear sky irradiance simulation in a mountainous region in Brazil, Geoscience and Remote Sensing Symposium, 2003. IGARSS '03. Proceedings. 2003 IEEE International , vol.5, no., pp. 3216-3218 vol.5, 2003, doi:10.1109/IGARSS.2003.1294734

4. Silva, B. and Bendix, J. 2012, Monitoring and modelling competing grassland species using very-high and high-resolution remote sensing in the Andes of Ecuador. Geoscience and Remote Sensing Symposium (IGARSS), 2012 IEEE International , vol., no., pp.5376-5378, 22-27 July 2012. doi:10.1109/IGARSS.2012.6352392

5. J. Bendix, B. Silva, K. Roos, D. O. Göttlicher, R. Rollenbeck, T. Nauss, E. Beck, "Model parameterization to simulate and compare the PAR absorption potential of two competing plant species", Int. J. of Biometeorology, vol. 54, n. 3, pp. 283-295, 2010.

6. B. Silva, K. Roos, I. Voss, N. König, R. Rollenbeck, R. Scheibe, E. Beck, J. Bendix, "Simulating canopy photosynthesis for two competing species of an anthropogenic grassland community in the Andes of southern Ecuador", Ecological Modelling, vol. 239, pp. 14-26, 2012.

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9. . K. Roos, R. Rollenbeck, T. Peters, J. Bendix, E. Beck, "Growth of Tropical Bracken (Pteridium arachnoideum): Response to Weather Variations and Burning", Invasive Plant Sci. and Manage., vol. 3, no. 4, pp. 402-411, 2010.

10. J. Bendix, E. Beck, "Spatial aspects of ecosystem research in a biodiversity hot spot of southern Ecuador – an introduction", Erdkunde, vol. 63, no. 4, pp. 305-308, 2009.

11. J. Bendix, R. Rollenbeck, D. Göttlicher, J. Cermak, "Cloud occurrence and cloud properties in Ecuador", J. of Climate Research, vol. 30, no. 2, pp. 133-147, 2006.

12. L. Tang, L. Tian, B. L. Steward, "Classification of broadleaf and grass weeds using gabor wavelets and an artificial neural network", Trans. of the ASAE, vol. 46, no. 4, pp. 1247-1254, 2003. [25]. A. J. Perez, F. Lopez, J. V. Benlloch, S. Christensen, "Colour and shape analysis techniques for weed detection in cereal fields", Comput. and Electronics in Agriculture, vol. 25, no. 3, pp. 197-212, 2000. [26]. G. A. Blackburn, J. I. Pitman, "Biophysical controls on the directional spectral reflectance properties of bracken (Pteridium aquilinum) canopies: Results of a field experiment", Int. J. of Remote Sensing, vol. 20, no. 11, pp. 2265-2282, 1999.

13. D. Göttlicher, J. Albert, T. Nauss, J. Bendix, "Optical properties of selected plants from a tropical mountain ecosystem – Traits for plant functional types to parametrize a land surface model", Ecological Modelling, vol. 222, no. 3, pp. 493-502, 2011. [32]. J. A. Richards, X. Jia. Remote sensing digital image analysis: an introduction. Heidelberg: Springer, 2005. [33]. Grass Development Team, Geographic Resources Analysis Support System (GRASS) Software. Open Source Geospatial Foundation Project. http://grass.osgeo.org, 2012. [34]. D. Rocchini, M. Metz, A. Frigeri, L. Delucchi, M. Marcantonio, M. Neteler, "Robust rectification of aerial photographs in an open source environment", Comput. & Geosci., vol. 39, pp. 145-151, 2012.

14. X. Chen, L. Vierling, "Spectral mixture analyses of hyperspectral data acquired using a tethered balloon", Remote Sensing of Environment, vol. 103, no. 3, pp. 338-350, 2006. [15]. Y. Inoue, S. Morinaga, A. Tomita, "A blimp-based remote sensing system for low-altitude monitoring of plant variables: A preliminary experiment for agricultural and ecological applications", Int. J. of Remote Sensing, vol. 21, no. 2, pp. 379-385, 2000. [16]. L. A. Vierling, M. Fersdahl, X. Chen, Z. Li, P. Zimmerman, "The Short Wave Aerostat-Mounted Imager (SWAMI): A novel platform for acquiring remotely sensed data from a tethered balloon", Remote Sensing of Environment, vol. 103, no. 3, pp. 255-264, 2006. [17]. B. P. Friedrich, J. Becker, B. Brimer, B. J. Merkel, "Low-cost aerial photography for high-resolution mapping of hydrothermal areas in Yellowstone National Park", Int. J. of Remote Sensing, vol. 29, no. 6, pp. 1781-1794, 2008. [18]. D. G. Leckie, F. A. Gougeon, S. Tinis, T. Nelson, C. N. Burnett, D. Paradine, "Automated tree recognition in old growth conifer stands with high resolution digital imagery", Remote Sensing of Environment, vol. 94, no. 3, pp. 311-326, 2005. [19]. L. T. Waser, C. Ginzler, M. Kuechler, E. Baltsavias, L. Hurni, "Semi- automatic classification of tree species in different forest ecosystems by spectral and geometric variables derived from Airborne Digital Sensor (ADS40) and RC30 data", Remote Sensing of Environment, vol. 115, no. 1, pp. 76-85, 2011. [20]. A. B. Massada, O. Gabay, A. Perevolotsky, Y. Carmel, "Quantifying the effect of grazing and shrub-clearing on small scale spatial pattern of vegetation", Landscape Ecology, vol. 23, no. 3, pp. 327-339, 2008. [21]. J. P. Lesschen, L. H. Cammeraat, A. M. Kooijman, B. van Wesemael, "Development of spatial heterogeneity in vegetation and soil properties after land abandonment in a semi-arid ecosystem", J. of Arid Environments, vol. 72, no. 11, pp. 2082-2092, 2008. [22]. H. T. Søgaard, "Weed Classification by Active Shape Models", Biosystems Eng., vol. 91, no. 3, pp. 271-281, 2005. [23]. M. D. Woebbecke, E. G. Meyer, K. Von Bargen, A. D. Mortensen, "Shape features for identifying young weeds using image analysis", Trans. of the ASAE, vol. 38, no. 1, pp. 271-281, 1995.

15. Silva, B. and Bendix J. 2010. Atmosphere-vegetation modelling and assessment of photosynthesis for two grassland competing species. European Geoscience Union -Conference, Vienna, Austria, 02 – 07 May 2010

16. John I. Pitman, "Absorption of photosynthetically active radiation, radiation use efficiency and spectral reflectance of bracken [Pteridium aquilinum (L .) Kuhnl] Canopies", vol. 85, no. 2, pp. 101-111, 2000. [36]. Y. Wu, F. Y. Shih, J. Shi, Y. Wu, "A top-down region dividing approach for image segmentation", Pattern Recognition, vol. 41, no. 6, 1948-1960, 2008. [37]. R. M. Haralick, K. Shanmugam, I. Dinstein, "Textural Features for Image Classification", IEEE Trans. on Syst., Man and Cybernetics, vol. SMC-3, no. 6, pp. 610-621, 1973. [38]. R.T.T. Forman, Land mosaics: The ecology of landscapes and regions. Cambridge University Press, Cambridge, ch. 4, pp. 141-142. [39]. J. H. Friedman, "Greedy Function Approximation: A Gradient Boosting Machine", The Ann. of Stat., vol. 29, no. 5, pp. 1189-1232, 2001. [40]. G. Ridgeway. (2012, 12, 9). Generalized Boosted Models: A guide to the gbm package. Online]. Available: http://CRAN.R- project.org/package=gbm [41]. J. Elith, J. R. Leathwick, T. Hastie, "A working guide to boosted regression trees", The J. of Animal Ecology, vol. 77, no. 4, pp. 802-813, 2008. [42]. R Development Core Team (2012, 10, 26). R: A language and environment for statistical computing. [Online]. Available: http://www.R-project.org [43]. J. A. Hanley, B. J. McNeil, " The meaning and use of the area under a Receiver Operating Characteristic (ROC) curve " , Radiology, vol. 143, pp. 29-36, 1982.

17. Silva, B., Lehnert, L., and Bendix J. 2011. Balloon aerial photography applied to the investigation of the southern bracken. GTÖ -Society for Tropical Ecology -Conference, Frankfurt, Feb. 2011

18. J. Pearce, S. Ferrier, " Evaluating the predictive performance of habitat models developed using logistic regression " , Ecological Modelling, vol. 133, pp. 225-245, 2000. 132 Work Experience 2005 Interpretation and audit in the PRODES (Amazonian Forest Monitoring by Satellite) program, Sao Jose dos Campos, Brazil. 2004 Consultant at " Fortification of Management Council in the Serra da Mantiqueira, Atlantic Forest Protected Area " 2000-2001 System analyst at PROGEO (LLC), Pantanal, Brazil, with land survey and planning.

19. J. E. Taylor, "Factors Causing Variation in Reflectance Measurements from Bracken in Eastern Australia", Remote Sensing of Environment, vol. 43, no. 2, pp. 217-229, 1993. [28]. G. A. Blackburn, C. M. Steele, "Towards the Remote Sensing of Matorral Vegetation Physiology: Relationships between Spectral Reflectance, Pigment, and Biophysical Characteristics of Semiarid Bushland Canopies", Remote Sensing of Environment, vol. 70, no. 3,pp. 278-292, 1999.

20. Lopes, P.M.O.; Silva, B.S.G.; Bottino, M.J.; Valeriano, D.M. Irradiância solar incidente modelada a partir de dados do sensor MODIS. In: Rudorff, B.F.T.; Shimabukuro, Y.E.; Ceballos. J.C. (Eds.). O Sensor MODIS e suas aplicações ambientais no Brasil. 1 ed. São José dos Campos: Bookimage, 2006, p. 1-448. 145 Selected publications on events:

21. . D. Göttlicher, A. Obregón, J. Homeier, R. Rollenbeck, T. Nauss, J. Bendix, "Land-cover classification in the Andes of southern Ecuador using Landsat ETM+ data as a basis for SVAT modelling", Int. J. of Remote Sensing, vol. 30, no. 8, pp. 1867-1886, 2009.

22. Language skills

23. . J. S. Aber, " Lighter-than-Air Platforms for Small-Format Aerial Photography " , Trans. of the Kansas Academy of Sci., vol. 107, no. 1/2, pp. 39-44, 2004.

24. . K. C. Swain and, H. P. W. Jayasuriya, "Low Altitude Remote Sensing applications for diversified farming conditions in developing countries: an overview", Asia-Pacific J. of Rural Develop., vol. 18, no. 2, pp. 81-98, 2008.

25. Master thesis:

26. Silva, B. and Bendix J. 2011. Modelling and monitoring of vegetation growth from leaf to plot scale. Proceedings 3rd iLEAPS Science Conference, Garmisch-Partenkirchen, 20. Sep 2011. ESA Special Publications SP-688.

27. German, English, and Spanish (native Portuguese speaker) Personal Bibliography Peer-reviewed publications:

28. Silva, B.S.G. Permanent Plot Selection in Mountainous Ecosystems (translation of " Seleção de Parcelas Permanentes em Ecossistemas Montanhosos " . M.

29. J. S. Aber, I. Marzolff, J. B. Ries, Small-Format Aerial Photography. Amsterdam: Elsevier Sci., 2010, pp. 85–87.

30. Silva, B. et al. 2008. Some aspects of climate and radiation into a grassland competition model, AKKlima Symposium, Nov. 2008, Aachen, Germany Silva, B. S. G.; Valeriano, D. M.; Correção atmosférica e topográfica de imagens de satélite em terrenos montanhosos. Proceedings. XII Simp. Brasileiro de Sensoriamento Remoto, 2005, INPE, p. 3587-3594.

31. Sc. Thesis on Remote Sensing. Publication of INPE, National Institute for Spatial Research ) São José dos Campos, Brazil. Book chapter:

32. D. Wundram, J. Löffler, "High-resolution spatial analysis of mountain landscapes using a low-altitude remote sensing approach", Int. J. of Remote Sensing, vol. 29, no. 4, pp. 961-974, 2008. [11]. M. Miyamoto, K. Yoshino, T. Nagano, T. Ishida, Y. Sato, "Use of balloon aerial photography for classification of Kushiro wetland vegetation, northeastern Japan", Wetlands, vol. 24, no. 3, pp. 701-710, 2004. [12]. R. M. Llovería, F. P-C., A. García-Martín, J. R. Fernández, "Combined Methodology Based on Field Spectrometry and Digital Photography for Estimating Fire Severity", IEEE Journal of selected topics in applied earth observations and remote sensing, vol. 1, no. 4, pp.226-274, 2008 [13]. F. Artigas, I. C. Pechman, "Balloon imagery verification of remotely sensed Phragmites australis expansion in an urban estuary of New Jersey, USA", Landscape and Urban Planning, vol. 95, no. 3, pp. 105- 112, 2010.