Visualization and data exploration of chromosome conformation capture data using Voronoi diagrams with v3c-viz

Visualization and data exploration of chromosome conformation capture data using Voronoi diagrams with v3c-viz

Chromosome conformation capture (3C) sequencing approaches, like Hi-C or micro-C, allow for an unbiased view of chromatin interactions. Most analysis methods rely on so-called interaction matrices, which are derived from counting read pairs in bins of fixed size. Here, we propose the Voronoi diagr...

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Autori principali: Race, Alan M., Fuchs, Alisa, Chung, Ho-Ryun
Natura: Articolo
Lingua:inglese
Pubblicazione: Philipps-Universität Marburg 2024
Soggetti:
Chromatin analysis
Software
Bioinformatics
Medizin
Medical sciences Medicine
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